BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D08SP1|AL425689
(747 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1271 1449 0.0
>3x_Contig1271
Length = 7459
Score = 1449 bits (731), Expect = 0.0
Identities = 747/750 (99%), Gaps = 3/750 (0%)
Strand = Plus / Minus
Query: 1 atctcgcaaaaagtttcagttgaaaatcttaacaaatgacgacttatgcgaa--aattct 58
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2851 atctcgcaaaaagtttcagttgaaaatcttaacaaatgacgacttatgcgaagcaattct 2792
Query: 59 atcgctgaagcatatgaagcatttaaacgtagggaatgttgtgtggttaatgcaaaggga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2791 atcgctgaagcatatgaagcatttaaacgtagggaatgttgtgtggttaatgcaaaggga 2732
Query: 119 catgaaaaggctcattgtccacagcatggaaagttgcataatcgaggatcgttgtcttga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2731 catgaaaaggctcattgtccacagcatggaaagttgcataatcgaggatcgttgtcttga 2672
Query: 179 caaaatctatatgaatttcgaggggagtggattacaaactaacttaccacttgctggtca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671 caaaatctatatgaatttcgaggggagtggattacaaactaacttaccacttgctggtca 2612
Query: 239 aggcctattgaaagcgatggtactattacaggtgataactgatatgacaaataactgcag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2611 aggcctattgaaagcgatggtactattacaggtgataactgatatgacaaataactgcag 2552
Query: 299 cgatgatcagatactagaatggttcgaattaaggtggataccaacctttcggagagtatc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2551 cgatgatcagatactagaatggttcgaattaaggtggataccaacctttcggagagtatc 2492
Query: 359 ccaacccgcagacctagtgtatctagcgcgggcctgtgatcaactacactacgtgataca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2491 ccaacccgcagacctagtgtatctagcgcgggcctgtgatcaactacactacgtgataca 2432
Query: 419 aagtgaggaatcaccaacatatactcgtgttggggaagtgctaataacggaatctcatac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2431 aagtgaggaatcaccaacatatactcgtgttggggaagtgctaataacggaatctcatac 2372
Query: 479 cggacactacaaatatgagatatcaagaaacgttaacaatgtctacctaacgatccagat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 cggacactacaaatatgagatatcaagaaacgttaacaatgtctacctaacgatccagat 2312
Query: 539 tgaaaatgggaaaccggacaccattacagacgttaaattgaaagagtgctccgataggct 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 tgaaaatgggaaaccggacaccattacagacgttaaattgaaagagtgctccgataggct 2252
Query: 599 tttagaaagggtctctaacctcaggaagaatcagctattacaacacacaggagagaattt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 tttagaaagggtctctaacctcaggaagaatcagctattacaacacacaggagagaattt 2192
Query: 659 cttctctaccgca-gtctagcatagaaagacaaaagaaaacaacgaccgggtaacctatg 717
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 cttctctaccgcaggtctagcatagaaagacaaaagaaaacaacgaccgggtaacctatg 2132
Query: 718 atcttagattcgttattttcccgataccgg 747
||||||||||||||||||||||||||||||
Sbjct: 2131 atcttagattcgttattttcccgataccgg 2102
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4631
Number of Sequences: 1807
Number of extensions: 4631
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 747
length of database: 10,358,551
effective HSP length: 16
effective length of query: 731
effective length of database: 10,329,639
effective search space: 7550966109
effective search space used: 7550966109
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)